A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples

Naccache SN, Federman S, Veeraraghavan N, Zaharia M, Lee D, Samayoa E, Bouquet J, Greninger AL, Luk KC, Enge B, Wadford DA, Messenger SL, Genrich GL, Pellegrino K, Grard G, Leroy E, Schneider BS, Fair JN, Martínez MA, Isa P10, Crump J, DeRisi JL, Sittler 6, Hackett J Jr, Miller S, Chiu CY (2014).

DOI: 10.1101/gr.171934.113. Epub 2014 Jun 4.